Berryman, Joshua T.: search on Z-Library

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1

First-principles modeling of chemistry in mixed solvents: Where to go from here?

Maldonado, Alex M., Basdogan, Yasemin, Berryman, Joshua T., Rempe, Susan B., Keith, John A.

Journal:

The Journal of Chemical Physics

Year:

2020

File:

PDF, 1.82 MB

2020

2

A Feasibility Study Using a Machine Learning Suicide Risk Prediction Model Based on Open-Ended Interview Language in Adolescent Therapy Sessions

Cohen, Joshua, Wright-Berryman, Jennifer, Rohlfs, Lesley, Wright, Donald, Campbell, Marci, Gingrich, Debbie, Santel, Daniel, Pestian, John

Journal:

International Journal of Environmental Research and Public Health

Year:

2020

File:

PDF, 961 KB

2020

3

Deciphering drift time measurements from travelling wave ion mobility spectrometry-mass spectrometry studies

Smith, David, Knapman, Tom, Campuzano, Iain, Malham, Richard, Berryman, Joshua, Radford, Sheen, Ashcroft, Alison

Journal:

European Journal of Mass Spectrometry

Year:

2009

Language:

english

File:

PDF, 2.15 MB

english, 2009

4

Systematic Examination of Polymorphism in Amyloid Fibrils by Molecular-Dynamics Simulation

Berryman, Joshua T., Radford, Sheena E., Harris, Sarah A.

Journal:

Biophysical Journal

Year:

2011

Language:

english

File:

PDF, 1020 KB

english, 2011

5

DNA partitions into triplets under tension in the presence of organic cations, with sequence evolutionary age predicting the stability of the triplet phase

Taghavi, Amirhossein, van der Schoot, Paul, Berryman, Joshua T.

Journal:

Quarterly Reviews of Biophysics

Year:

2017

Language:

english

File:

PDF, 989 KB

english, 2017

6

Sampling rare events in nonequilibrium and nonstationary systems

Berryman, Joshua T., Schilling, Tanja

Journal:

The Journal of Chemical Physics

Year:

2010

Language:

english

File:

PDF, 590 KB

english, 2010

7

The Flexible Rare Event Sampling Harness System (FRESHS)

Kratzer, Kai, Berryman, Joshua T., Taudt, Aaron, Zeman, Johannes, Arnold, Axel

Journal:

Computer Physics Communications

Year:

2014

Language:

english

File:

PDF, 1.26 MB

english, 2014

8

Crystal nucleation mechanism in melts of short polymer chains under quiescent conditions and under shear flow

Anwar, Muhammad, Berryman, Joshua T., Schilling, Tanja

Journal:

The Journal of Chemical Physics

Year:

2014

Language:

english

File:

PDF, 2.00 MB

english, 2014

9

Amyloid Evolution: Antiparallel Replaced by Parallel

Zanjani, Ali Asghar Hakami, Reynolds, Nicholas P., Zhang, Afang, Schilling, Tanja, Mezzenga, Raffaele, Berryman, Joshua T.

Journal:

Biophysical Journal

Year:

2020

File:

PDF, 2.20 MB

2020

10

Absolute Free Energies for Biomolecules in Implicit or Explicit Solvent

Berryman, Joshua T., Schilling, Tanja

Journal:

Physics Procedia

Year:

2014

Language:

english

File:

PDF, 636 KB

english, 2014

11

Considerations in experimental and theoretical collision cross-section measurements of small molecules using travelling wave ion mobility spectrometry-mass spectrometry

Tom W. Knapman, Joshua T. Berryman, Iain Campuzano, Sarah A. Harris, Alison E. Ashcroft

Journal:

International Journal of Mass Spectrometry

Year:

2010

Language:

english

File:

PDF, 572 KB

english, 2010

12

Kinetic Control of Parallel versus Antiparallel Amyloid Aggregation via Shape of the Growing Aggregate

Zanjani, Ali Asghar Hakami, Reynolds, Nicholas P., Zhang, Afang, Schilling, Tanja, Mezzenga, Raffaele, Berryman, Joshua T.

Journal:

Scientific Reports

Year:

2019

Language:

english

File:

PDF, 15.13 MB

english, 2019

13

Thermodynamic Description of Polymorphism in Q- and N-Rich Peptide Aggregates Revealed by Atomistic Simulation

Berryman, Joshua T., Radford, Sheena E., Harris, Sarah A.

Journal:

Biophysical Journal

Year:

2009

Language:

english

File:

PDF, 1.21 MB

english, 2009

14

Kinetic Control of Parallel versus Antiparallel Amyloid Aggregation via Shape of the Growing Aggregate

Zanjani, Ali Asghar Hakami, Reynolds, Nicholas P., Zhang, Afang, Schilling, Tanja, Mezzenga, Raffaele, Berryman, Joshua T.

Journal:

Scientific Reports

Year:

2019

File:

PDF, 15.13 MB

2019

15

The early crystal nucleation process in hard spheres shows synchronised ordering and densification

Berryman, Joshua T., Anwar, Muhammad, Dorosz, Sven, Schilling, Tanja

Journal:

The Journal of Chemical Physics

Year:

2016

Language:

english

File:

PDF, 1.15 MB

english, 2016

16

Free Energies by Thermodynamic Integration Relative to an Exact Solution, Used to Find the Handedness-Switching Salt Concentration for DNA

Berryman, Joshua T., Schilling, Tanja

Journal:

Journal of Chemical Theory and Computation

Year:

2013

Language:

english

File:

PDF, 1005 KB

english, 2013

17

DNA partitions into triplets under tension in the presence of organic cations, with sequence evolutionary age predicting the stability of the triplet phase – CORRIGENDUM

Taghavi, Amirhossein, van der Schoot, Paul, Berryman, Joshua T.

Journal:

Quarterly Reviews of Biophysics

Year:

2018

Language:

english

File:

PDF, 144 KB

english, 2018

18

Heterogeneity spacers in 16S rDNA primers improve analysis of mouse gut microbiomes via greater nucleotide diversity

Jensen, Elizabeth A, Berryman, Darlene E, Murphy, Erin R, Carroll, Ronan K, Busken, Joshua, List, Edward O, Broach, William H

Journal:

Year:

2019

Language:

english

File:

PDF, 1.71 MB

english, 2019

19

ILQINS Hexapeptide, Identified in Lysozyme Left-Handed Helical Ribbons and Nanotubes, Forms Right-Handed Helical Ribbons and Crystals

Lara, Cecile, Reynolds, Nicholas P., Berryman, Joshua T., Xu, Anqiu, Zhang, Afang, Mezzenga, Raffaele

Journal:

Journal of the American Chemical Society

Year:

2014

Language:

english

File:

PDF, 3.56 MB

english, 2014

20

Author Correction: Competition between crystal and fibril formation in molecular mutations of amyloidogenic peptides

Reynolds, Nicholas P., Adamcik, Jozef, Berryman, Joshua T., Handschin, Stephan, Zanjani, Ali Asghar Hakami, Li, Wen, Liu, Kun, Zhang, Afang, Mezzenga, Raffaele

Journal:

Nature Communications

Year:

2017

Language:

english

File:

PDF, 263 KB

english, 2017

21

Growth hormone deficiency and excess alter the gut microbiome in adult male mice

Jensen, Elizabeth A, Young, Jonathan A, Jackson, Zachary, Busken, Joshua, List, Edward O, Carroll, Ronan K, Kopchick, John J, Murphy, Erin R, Berryman, Darlene E

Journal:

Year:

2020

Language:

english

File:

PDF, 2.12 MB

english, 2020

22

Competition between crystal and fibril formation in molecular mutations of amyloidogenic peptides

Reynolds, Nicholas P., Adamcik, Jozef, Berryman, Joshua T., Handschin, Stephan, Zanjani, Ali Asghar Hakami, Li, Wen, Liu, Kun, Zhang, Afang, Mezzenga, Raffaele

Journal:

Nature Communications

Year:

2017

Language:

english

File:

PDF, 2.43 MB

english, 2017

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